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data_topics_collection

edam_id mesh_id ncit_id id category name description subclass_of related_to contributor_name contributor_github_name contributor_orcid
edam.topic:3070 mesh:D001695 ncit:C16345 B2AI_TOPIC:1 B2AI_TOPIC:DataTopic Biology Data involving any study of living organisms at any scale. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D002477 ncit:C12508 B2AI_TOPIC:2 B2AI_TOPIC:DataTopic Cell Observations and measurements of cellular physiology and variation in cell types. B2AI_TOPIC:20 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:1086 mesh:D000080911 ncit:C188483 B2AI_TOPIC:3 B2AI_TOPIC:DataTopic Cheminformatics Data regarding the physical properties of chemical compounds. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D008499 ncit:C15783 B2AI_TOPIC:4 B2AI_TOPIC:DataTopic Clinical Observations All data derived from observations of individual clinical patients, whether as part of a clinical trial or in the course of diagnosis, treatment, and follow-up. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:0006 mesh:D003625 ncit:C25474 B2AI_TOPIC:5 B2AI_TOPIC:DataTopic Data Collected information at any stage of processing and analysis. Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D003710 ncit:C16495 B2AI_TOPIC:6 B2AI_TOPIC:DataTopic Demographics Data describing a subset of a population, including sex, age, ethnicity, geographic location, or other factors. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:3667 mesh:D004194 ncit:C2991 B2AI_TOPIC:7 B2AI_TOPIC:DataTopic Disease Data describing a disordered health state and its relationships to phenotype, genotype, other organisms, and environmental exposures. B2AI_TOPIC:5 B2AI_TOPIC:25 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:0993 mesh:D004364 ncit:C1909 B2AI_TOPIC:8 B2AI_TOPIC:DataTopic Drug Data regarding the properties of substances intended to be used or investigated for their therapeutic properties. B2AI_TOPIC:3 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:3861 mesh:D055991 ncit:C142529 B2AI_TOPIC:9 B2AI_TOPIC:DataTopic EHR Electronic health record data, including structured and unstructured text, lab values, and associated metadata. B2AI_TOPIC:4 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D004562 ncit:C168186 B2AI_TOPIC:10 B2AI_TOPIC:DataTopic EKG Measurements of the electrical signals of the heart over time. B2AI_TOPIC:37 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.topic:3855 mesh:D004777 ncit:C16551 B2AI_TOPIC:11 B2AI_TOPIC:DataTopic Environment Descriptions and measurements of the relationships between people and their ecosystem(s). B2AI_TOPIC:1 B2AI_TOPIC:3 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:3494 mesh:D005796 ncit:C16612 B2AI_TOPIC:12 B2AI_TOPIC:DataTopic Gene One or a select set of DNA sequences, coding or non-coding, and their properties. B2AI_TOPIC:13 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:1288 mesh:D016678 ncit:C16629 B2AI_TOPIC:13 B2AI_TOPIC:DataTopic Genome One or more complete collections of gene sequences from a single individual, potentially including ony exon sequences. B2AI_TOPIC:23 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:3720 ncit:C25341 B2AI_TOPIC:14 B2AI_TOPIC:DataTopic Geolocation Measurements describing the location of an object or person on planet Earth. B2AI_TOPIC:5 B2AI_TOPIC:18 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:2968 ncit:C48179 B2AI_TOPIC:15 B2AI_TOPIC:DataTopic Image Visual representation of an observation, including but not limited to photographs, micrographs, radiology results, or data plots. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D008091 ncit:C48471 B2AI_TOPIC:16 B2AI_TOPIC:DataTopic Literature The unstructured text contents of a selection of scholarly documents and/or the metadata of those documents. B2AI_TOPIC:32 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:2603 mesh:D055442 B2AI_TOPIC:17 B2AI_TOPIC:DataTopic Metabolome Measurements of the presence, structure, and potential amount of small molecule metabolites within a sample from one individual, cell, organ, sample, or site. B2AI_TOPIC:23 B2AI_TOPIC:3 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
ncit:C97005 B2AI_TOPIC:18 B2AI_TOPIC:DataTopic mHealth Mobile health data generated by individuals using health-related mobile applications and devices, concerning location, physical activity, and physiological metrics. B2AI_TOPIC:5 B2AI_TOPIC:14 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:3424 mesh:D008853 ncit:C16853 B2AI_TOPIC:19 B2AI_TOPIC:DataTopic Microscale Imaging Images obtained through microscopy (e.g., optical, fluorescence, electron). B2AI_TOPIC:15 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.topic:3047 mesh:D008967 ncit:C16872 B2AI_TOPIC:20 B2AI_TOPIC:DataTopic Molecular Biology Any data concerning studies of the structure, function, and interactions of biological molecules. B2AI_TOPIC:1 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:2600 ncit:C61377 B2AI_TOPIC:21 B2AI_TOPIC:DataTopic Networks And Pathways Models of the interactions among biological entities or concepts. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:3424 mesh:D059906 ncit:C173635 B2AI_TOPIC:22 B2AI_TOPIC:DataTopic Neurologic Imaging Images obtained through one or more brain imaging techniques, including computed tomography, positron emission tomography, magnetic resonance imaging, or imaging of associated body structures (e.g., angiography). B2AI_TOPIC:15 B2AI_TOPIC:48 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.topic:3391 mesh:D000095028 B2AI_TOPIC:23 B2AI_TOPIC:DataTopic Omics Data involving two or more comprehensive biomolecular screens, such as those of genomes, transcriptomes, proteomes, or others. B2AI_TOPIC:20 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
ncit:C38060 B2AI_TOPIC:24 B2AI_TOPIC:DataTopic Ophthalmic Imaging Images of the interior and/or exterior of the eye. B2AI_TOPIC:15 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:3275 mesh:D010641 ncit:C16977 B2AI_TOPIC:25 B2AI_TOPIC:DataTopic Phenotype The set of observable traits of an organism, whether constant or in response to a given set of conditions. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:2976 mesh:D011506 ncit:C17021 B2AI_TOPIC:26 B2AI_TOPIC:DataTopic Protein One or a select set of amino acid sequences and their properties. B2AI_TOPIC:28 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:1460 mesh:D011487 ncit:C13303 B2AI_TOPIC:27 B2AI_TOPIC:DataTopic Protein Structure Model Representations of the three-dimensional structure of a protein in one or more states or conformations. B2AI_TOPIC:26 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D020543 ncit:C18276 B2AI_TOPIC:28 B2AI_TOPIC:DataTopic Proteome Measurements of the presence, sequence, and potential amount of proteins within a sample from one individual, organ, sample, or site. B2AI_TOPIC:23 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D064890 ncit:C171586 B2AI_TOPIC:29 B2AI_TOPIC:DataTopic SDoH Social Determinants of Health, i.e., properties of one or more people contributing to their health, wellness, and disease risk. B2AI_TOPIC:6 B2AI_TOPIC:11 B2AI_TOPIC:14 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D061108 ncit:C97003 B2AI_TOPIC:30 B2AI_TOPIC:DataTopic Social Media The unstructured text derived from social media correspondence. B2AI_TOPIC:32 B2AI_TOPIC:6 B2AI_TOPIC:14 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D006306 ncit:C17176 B2AI_TOPIC:31 B2AI_TOPIC:DataTopic Survey Data submitted by members of a study population, usually in response to specific questions. B2AI_TOPIC:5 B2AI_TOPIC:6 B2AI_TOPIC:14 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:2526 ncit:C25704 B2AI_TOPIC:32 B2AI_TOPIC:DataTopic Text Any unstructured or semi-structured collection of written human language. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:3495 mesh:D012333 ncit:C1936 B2AI_TOPIC:33 B2AI_TOPIC:DataTopic Transcript One or a select set of RNA sequences derived from gene expression, and their properties. B2AI_TOPIC:34 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.data:2603 mesh:D059467 ncit:C153194 B2AI_TOPIC:34 B2AI_TOPIC:DataTopic Transcriptome Measurements of the presence, sequence, and potential expression level of gene transcripts within a sample from one individual, cell, organ, sample, or site. B2AI_TOPIC:23 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D014644 ncit:C25713 B2AI_TOPIC:35 B2AI_TOPIC:DataTopic Variant An alteration in a gene sequence relative to another set of sequences, whether associated with a phenotype or not. B2AI_TOPIC:12 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D014831 ncit:C92692 B2AI_TOPIC:36 B2AI_TOPIC:DataTopic Voice Audio data produced by human speech, not including non-linguistic utterances. B2AI_TOPIC:37 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
B2AI_TOPIC:37 B2AI_TOPIC:DataTopic Waveform Representations of a signal as a function of time, including audio recordings or electrocardiogram readings. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D015190 ncit:C92744 B2AI_TOPIC:38 B2AI_TOPIC:DataTopic Glucose Monitoring Tracking a person's glucose levels over time, whether in real-time using a small sensor inserted under the skin, or through glucose readings collected at regular intervals. B2AI_TOPIC:18 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
ncit:C187892 B2AI_TOPIC:39 B2AI_TOPIC:DataTopic Activity Monitoring Mobile health data involving estimates of physical activity frequency, duration, and/or intensity. May include data from accelerometers, pedometers, or other mobile devices. B2AI_TOPIC:18 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
edam.topic:3571 B2AI_TOPIC:40 B2AI_TOPIC:DataTopic Governance All data components created to maintain security, privacy, accuracy, availability, and usability of other parts of the same or other data. B2AI_TOPIC:5 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D009474 ncit:C12623 B2AI_TOPIC:41 B2AI_TOPIC:DataTopic Neuron Neurons, also known as nerve cells, are the fundamental units of the brain and nervous system. They are responsible for transmitting electrical and chemical signals to enable communication throughout the body. This topic refers to studies of neurons and their properties. B2AI_TOPIC:2 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D032383 ncit:C13002 B2AI_TOPIC:42 B2AI_TOPIC:DataTopic Cardiomyocyte Cardiomyocytes are the muscle cells of the heart. They are responsible for the contraction of the heart muscle, which enables the heart to pump blood throughout the body. This topic refers to studies of cardiomyocytes and their properties. B2AI_TOPIC:2 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D003920 ncit:C2985 B2AI_TOPIC:43 B2AI_TOPIC:DataTopic Diabetes Diabetes is a chronic disease that occurs when the body is unable to regulate blood sugar levels properly. This topic refers to data related to any form of diabetes mellitus and its management. B2AI_TOPIC:7 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
mesh:D005128 ncit:C26767 B2AI_TOPIC:44 B2AI_TOPIC:DataTopic Eye Diseases Eye diseases are conditions that affect the eye and its surrounding structures. This topic refers to data related to any eye disease, including but not limited to cataracts, glaucoma, and macular degeneration. B2AI_TOPIC:7 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
B2AI_TOPIC:45 B2AI_TOPIC:DataTopic Voice Disorders Voice disorders are conditions that affect the vocal cords and other parts of the larynx. This topic refers to data related to any voice disorder, including but not limited to vocal cord paralysis, laryngitis, and vocal nodules. B2AI_TOPIC:7 B2AI_TOPIC:36 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
B2AI_TOPIC:46 B2AI_TOPIC:DataTopic Respiration Respiration is the process of breathing, which involves the exchange of oxygen and carbon dioxide between the body and the environment. This topic refers to data related to any aspect of respiration, including but not limited to lung function, respiratory diseases, and breathing patterns. B2AI_TOPIC:1 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
B2AI_TOPIC:47 B2AI_TOPIC:DataTopic Respiratory Disorders Respiratory disorders are conditions that affect the lungs and other parts of the respiratory system. This topic refers to data related to any respiratory disorder, including but not limited to asthma, chronic obstructive pulmonary disease (COPD), and pneumonia. B2AI_TOPIC:7 B2AI_TOPIC:46 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
B2AI_TOPIC:48 B2AI_TOPIC:DataTopic Neurology Neurology is the branch of medicine that deals with disorders of the nervous system, including the brain, spinal cord, and peripheral nerves. This topic refers to data related to any aspect of neurology, including but not limited to neurological diseases, brain imaging, and nerve function. B2AI_TOPIC:4 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
B2AI_TOPIC:49 B2AI_TOPIC:DataTopic Neurological Disorders Neurological disorders are conditions that affect the nervous system, including the brain, spinal cord, and peripheral nerves. This topic refers to data related to any neurological disorder, including but not limited to Alzheimer's disease, Parkinson's disease, and multiple sclerosis. B2AI_TOPIC:48 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
B2AI_TOPIC:50 B2AI_TOPIC:DataTopic Psychiatry Psychiatry is the branch of medicine that deals with mental health disorders, including depression, anxiety, and schizophrenia. This topic refers to data related to any aspect of psychiatry, including but not limited to mental health treatments, psychiatric diagnoses, and psychological assessments. B2AI_TOPIC:4 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831
B2AI_TOPIC:51 B2AI_TOPIC:DataTopic Psychiatric Disorders Psychiatric disorders are conditions that affect mental health, including mood disorders, anxiety disorders, and psychotic disorders. This topic refers to data related to any psychiatric disorder, including but not limited to major depressive disorder, generalized anxiety disorder, and schizophrenia. It also includes data related to mood disorders. B2AI_TOPIC:50 Harry Caufield caufieldjh ORCID:0000-0001-5705-7831