Obtain proteome data from human cell samples

ID: B2AI_USECASE:11

Name: Obtain proteome data from human cell samples.

Description: The proteome is the complete set of proteins that is expressed by a genome, cell, tissue, or organism at a given time and set of conditions. Proteome data refers to the information that is generated from studies of the proteome, such as the identification and characterization of the proteins that are expressed, their relative abundance, and any modifications that they may undergo. In the CM4AI project, proteome data is obtained through affinity purification coupled with tandem mass spectroscopy (AP-MS/MS).

Category: acquisition

Involved in: Experimental Design, Metadata Management

Data Topics:

Enables:

  • B2AI_USECASE:16 (Link cellular objects to functions through associations between proteins, cell structure proximity, and transcriptomics.)

Relevant to GCs:

  • B2AI_ORG:116

Standards and Tools:

External References:

  • EDAM:topic_0121

Contributor: Harry Caufield (ORCID:0000-0001-5705-7831)