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Class: DataStandardOrTool

Represents a standard or tool in the Bridge2AI Standards Registry.

URI: https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool

classDiagram class DataStandardOrTool click DataStandardOrTool href "../DataStandardOrTool/" NamedThing <|-- DataStandardOrTool click NamedThing href "../NamedThing/" DataStandardOrTool <|-- DataStandard click DataStandard href "../DataStandard/" DataStandardOrTool <|-- Registry click Registry href "../Registry/" DataStandardOrTool <|-- OntologyOrVocabulary click OntologyOrVocabulary href "../OntologyOrVocabulary/" DataStandardOrTool <|-- ModelRepository click ModelRepository href "../ModelRepository/" DataStandardOrTool <|-- SoftwareOrTool click SoftwareOrTool href "../SoftwareOrTool/" DataStandardOrTool <|-- ReferenceImplementation click ReferenceImplementation href "../ReferenceImplementation/" DataStandardOrTool <|-- TrainingProgram click TrainingProgram href "../TrainingProgram/" DataStandardOrTool : category DataStandardOrTool : collection DataStandardOrTool --> "*" StandardsCollectionTag : collection click StandardsCollectionTag href "../StandardsCollectionTag/" DataStandardOrTool : concerns_data_topic DataStandardOrTool --> "*" DataTopic : concerns_data_topic click DataTopic href "../DataTopic/" DataStandardOrTool : contribution_date DataStandardOrTool : contributor_github_name DataStandardOrTool : contributor_name DataStandardOrTool : contributor_orcid DataStandardOrTool : description DataStandardOrTool : formal_specification DataStandardOrTool : has_application DataStandardOrTool --> "*" Application : has_application click Application href "../Application/" DataStandardOrTool : has_relevant_data_substrate DataStandardOrTool --> "*" DataSubstrate : has_relevant_data_substrate click DataSubstrate href "../DataSubstrate/" DataStandardOrTool : has_relevant_organization DataStandardOrTool --> "*" Organization : has_relevant_organization click Organization href "../Organization/" DataStandardOrTool : has_training_resource DataStandardOrTool --> "*" DataStandardOrTool : has_training_resource click DataStandardOrTool href "../DataStandardOrTool/" DataStandardOrTool : id DataStandardOrTool : is_open DataStandardOrTool : name DataStandardOrTool : publication DataStandardOrTool : purpose_detail DataStandardOrTool : related_to DataStandardOrTool --> "*" NamedThing : related_to click NamedThing href "../NamedThing/" DataStandardOrTool : requires_registration DataStandardOrTool : responsible_organization DataStandardOrTool --> "*" Organization : responsible_organization click Organization href "../Organization/" DataStandardOrTool : subclass_of DataStandardOrTool --> "*" NamedThing : subclass_of click NamedThing href "../NamedThing/" DataStandardOrTool : url DataStandardOrTool : used_in_bridge2ai

Inheritance

Slots

Name Cardinality and Range Description Inheritance
collection *
StandardsCollectionTag
Tags for specific sets of standards direct
concerns_data_topic *
DataTopic
Subject standard is generally applied in the context of object data topic direct
has_relevant_organization *
Organization
Subject standard has some relationship to the object organization(s), includi... direct
has_training_resource *
DataStandardOrTool
Relevant training resources, standard usage manuals, or other documentation f... direct
purpose_detail 0..1
String
Text description of the standard or tool direct
is_open 0..1
Boolean
Is the standard or tool FAIR and available free of cost? direct
requires_registration 0..1
Boolean
Does usage of the standard or tool require registration of a user or group wi... direct
url 0..1
Uriorcurie
URL for basic documentation of the standard or tool direct
publication 0..1
Uriorcurie
Relevant publication for the standard or tool direct
formal_specification 0..1
Uriorcurie
Relevant code repository or other location for a formal specification of the ... direct
responsible_organization *
Organization
Organization(s) responsible for providing and/or supporting the standard or t... direct
has_relevant_data_substrate *
DataSubstrate
Subject standard has some relationship to the object data substrate(s), inclu... direct
id 1
Uriorcurie
A unique identifier for a thing NamedThing
category 0..1
CategoryType
CURIE for the high level ontology class in which this entity is categorized NamedThing
name 0..1
String
A human-readable name for a thing NamedThing
description 0..1
String
A human-readable description for a thing NamedThing
subclass_of *
NamedThing
Holds between two classes where the domain class is a specialization of the r... NamedThing
related_to *
NamedThing
A relationship that is asserted between two named things NamedThing
contributor_name 0..1
String
The name of the person who added this node NamedThing
contributor_github_name 0..1
String
The name of the github user who added this node NamedThing
contributor_orcid 0..1
Uriorcurie
The ORCiD of the person who added this node NamedThing
contribution_date 0..1
Date
The date on which the node was added NamedThing
used_in_bridge2ai 0..1
Boolean
True if the entity is used, developed, or otherwise related to work in the Br... NamedThing
has_application *
Application
A list of one or more specific applications of this entity to a specific purp... NamedThing

Usages

used by used in type used
DataStandardOrTool concerns_data_topic domain DataStandardOrTool
DataStandardOrTool has_relevant_organization domain DataStandardOrTool
DataStandardOrTool has_training_resource range DataStandardOrTool
DataStandardOrTool responsible_organization domain DataStandardOrTool
DataStandardOrTool has_relevant_data_substrate domain DataStandardOrTool
DataStandard concerns_data_topic domain DataStandardOrTool
DataStandard has_relevant_organization domain DataStandardOrTool
DataStandard has_training_resource range DataStandardOrTool
DataStandard responsible_organization domain DataStandardOrTool
DataStandard has_relevant_data_substrate domain DataStandardOrTool
BiomedicalStandard concerns_data_topic domain DataStandardOrTool
BiomedicalStandard has_relevant_organization domain DataStandardOrTool
BiomedicalStandard has_training_resource range DataStandardOrTool
BiomedicalStandard responsible_organization domain DataStandardOrTool
BiomedicalStandard has_relevant_data_substrate domain DataStandardOrTool
Registry concerns_data_topic domain DataStandardOrTool
Registry has_relevant_organization domain DataStandardOrTool
Registry has_training_resource range DataStandardOrTool
Registry responsible_organization domain DataStandardOrTool
Registry has_relevant_data_substrate domain DataStandardOrTool
OntologyOrVocabulary concerns_data_topic domain DataStandardOrTool
OntologyOrVocabulary has_relevant_organization domain DataStandardOrTool
OntologyOrVocabulary has_training_resource range DataStandardOrTool
OntologyOrVocabulary responsible_organization domain DataStandardOrTool
OntologyOrVocabulary has_relevant_data_substrate domain DataStandardOrTool
ModelRepository concerns_data_topic domain DataStandardOrTool
ModelRepository has_relevant_organization domain DataStandardOrTool
ModelRepository has_training_resource range DataStandardOrTool
ModelRepository responsible_organization domain DataStandardOrTool
ModelRepository has_relevant_data_substrate domain DataStandardOrTool
SoftwareOrTool concerns_data_topic domain DataStandardOrTool
SoftwareOrTool has_relevant_organization domain DataStandardOrTool
SoftwareOrTool has_training_resource range DataStandardOrTool
SoftwareOrTool responsible_organization domain DataStandardOrTool
SoftwareOrTool has_relevant_data_substrate domain DataStandardOrTool
ReferenceImplementation concerns_data_topic domain DataStandardOrTool
ReferenceImplementation has_relevant_organization domain DataStandardOrTool
ReferenceImplementation has_training_resource range DataStandardOrTool
ReferenceImplementation responsible_organization domain DataStandardOrTool
ReferenceImplementation has_relevant_data_substrate domain DataStandardOrTool
TrainingProgram concerns_data_topic domain DataStandardOrTool
TrainingProgram has_relevant_organization domain DataStandardOrTool
TrainingProgram has_training_resource range DataStandardOrTool
TrainingProgram responsible_organization domain DataStandardOrTool
TrainingProgram has_relevant_data_substrate domain DataStandardOrTool
DataStandardOrToolContainer data_standardortools_collection range DataStandardOrTool
UseCase standards_and_tools_for_gc_use range DataStandardOrTool
UseCase alternative_standards_and_tools range DataStandardOrTool
DataPart standards_and_tools range DataStandardOrTool

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/bridge2ai/standards-schema-all

Mappings

Mapping Type Mapped Value
self https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool
native https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool

LinkML Source

Direct

name: DataStandardOrTool
description: Represents a standard or tool in the Bridge2AI Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
is_a: NamedThing
slots:
- collection
- concerns_data_topic
- has_relevant_organization
- has_training_resource
- purpose_detail
- is_open
- requires_registration
- url
- publication
- formal_specification
- responsible_organization
- has_relevant_data_substrate

Induced

name: DataStandardOrTool
description: Represents a standard or tool in the Bridge2AI Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
is_a: NamedThing
attributes:
  collection:
    name: collection
    description: Tags for specific sets of standards.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: collection
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: StandardsCollectionTag
    multivalued: true
  concerns_data_topic:
    name: concerns_data_topic
    description: Subject standard is generally applied in the context of object data
      topic.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: related_to
    domain: DataStandardOrTool
    inherited: true
    alias: concerns_data_topic
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: DataTopic
    multivalued: true
  has_relevant_organization:
    name: has_relevant_organization
    description: Subject standard has some relationship to the object organization(s),
      including as a user. This is distinct from the responsible organization, which
      is the group providing or supporting the standard or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: related_to
    domain: DataStandardOrTool
    inherited: true
    alias: has_relevant_organization
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: Organization
    multivalued: true
  has_training_resource:
    name: has_training_resource
    description: Relevant training resources, standard usage manuals, or other documentation
      for the standard or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: has_training_resource
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: DataStandardOrTool
    multivalued: true
  purpose_detail:
    name: purpose_detail
    description: Text description of the standard or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: purpose_detail
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: string
  is_open:
    name: is_open
    description: Is the standard or tool FAIR and available free of cost?
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: is_open
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: boolean
  requires_registration:
    name: requires_registration
    description: Does usage of the standard or tool require registration of a user
      or group with some organization or managerial body?
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: requires_registration
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: boolean
  url:
    name: url
    description: URL for basic documentation of the standard or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: url
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    - Organization
    range: uriorcurie
  publication:
    name: publication
    description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: publication
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: uriorcurie
  formal_specification:
    name: formal_specification
    description: Relevant code repository or other location for a formal specification
      of the standard or tool. Often a URL, particularly to a Git repository.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: formal_specification
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: uriorcurie
  responsible_organization:
    name: responsible_organization
    description: Organization(s) responsible for providing and/or supporting the standard
      or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: DataStandardOrTool
    alias: responsible_organization
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: Organization
    multivalued: true
  has_relevant_data_substrate:
    name: has_relevant_data_substrate
    description: Subject standard has some relationship to the object data substrate(s),
      including whether it is intended to be used with the data substrate, or whether
      it is implemented through the data substrate.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: related_to
    domain: DataStandardOrTool
    inherited: true
    alias: has_relevant_data_substrate
    owner: DataStandardOrTool
    domain_of:
    - DataStandardOrTool
    range: DataSubstrate
    multivalued: true
  id:
    name: id
    description: A unique identifier for a thing.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  category:
    name: category
    description: CURIE for the high level ontology class in which this entity is categorized.
      Corresponds to the label for the entity type class, e.g., "B2AI_STANDARD:DataStandard".
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: type
    domain: NamedThing
    designates_type: true
    alias: category
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: category_type
  name:
    name: name
    description: A human-readable name for a thing.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: string
  subclass_of:
    name: subclass_of
    description: Holds between two classes where the domain class is a specialization
      of the range class.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    exact_mappings:
    - rdfs:subClassOf
    - MESH:isa
    narrow_mappings:
    - rdfs:subPropertyOf
    rank: 1000
    is_a: related_to
    domain: NamedThing
    inherited: true
    alias: subclass_of
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: NamedThing
    multivalued: true
  related_to:
    name: related_to
    description: A relationship that is asserted between two named things.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    domain: NamedThing
    inherited: true
    alias: related_to
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    - Organization
    symmetric: true
    range: NamedThing
    multivalued: true
  contributor_name:
    name: contributor_name
    description: The name of the person who added this node.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: contributor_name
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: string
  contributor_github_name:
    name: contributor_github_name
    description: The name of the github user who added this node.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: contributor_github_name
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: string
  contributor_orcid:
    name: contributor_orcid
    description: The ORCiD of the person who added this node.
    examples:
    - value: ORCID:0000-0001-1234-5678
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: contributor_orcid
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: uriorcurie
  contribution_date:
    name: contribution_date
    description: The date on which the node was added.
    examples:
    - value: '2023-03-20'
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: contribution_date
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: date
  used_in_bridge2ai:
    name: used_in_bridge2ai
    description: True if the entity is used, developed, or otherwise related to work
      in the Bridge2AI consortium. If false, the entity is not explicitly related
      to Bridge2AI. If not specified, it is not known if the entity is related to
      Bridge2AI.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: used_in_bridge2ai
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: boolean
  has_application:
    name: has_application
    description: A list of one or more specific applications of this entity to a specific
      purpose.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    domain: NamedThing
    alias: has_application
    owner: DataStandardOrTool
    domain_of:
    - NamedThing
    range: Application
    multivalued: true
    inlined: true
    inlined_as_list: true