Class: ReferenceImplementation

Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case.

URI: https://w3id.org/bridge2ai/standards-schema-all/ReferenceImplementation

classDiagram class ReferenceImplementation click ReferenceImplementation href "../ReferenceImplementation/" DataStandardOrTool <|-- ReferenceImplementation click DataStandardOrTool href "../DataStandardOrTool/" ReferenceImplementation : category ReferenceImplementation : collection ReferenceImplementation --> "*" StandardsCollectionTag : collection click StandardsCollectionTag href "../StandardsCollectionTag/" ReferenceImplementation : concerns_data_topic ReferenceImplementation --> "*" DataTopic : concerns_data_topic click DataTopic href "../DataTopic/" ReferenceImplementation : contribution_date ReferenceImplementation : contributor_github_name ReferenceImplementation : contributor_name ReferenceImplementation : contributor_orcid ReferenceImplementation : description ReferenceImplementation : formal_specification ReferenceImplementation : has_application ReferenceImplementation --> "*" Application : has_application click Application href "../Application/" ReferenceImplementation : has_relevant_data_substrate ReferenceImplementation --> "*" DataSubstrate : has_relevant_data_substrate click DataSubstrate href "../DataSubstrate/" ReferenceImplementation : has_relevant_organization ReferenceImplementation --> "*" Organization : has_relevant_organization click Organization href "../Organization/" ReferenceImplementation : has_training_resource ReferenceImplementation --> "*" DataStandardOrTool : has_training_resource click DataStandardOrTool href "../DataStandardOrTool/" ReferenceImplementation : id ReferenceImplementation : is_open ReferenceImplementation : name ReferenceImplementation : publication ReferenceImplementation : purpose_detail ReferenceImplementation : related_to ReferenceImplementation --> "*" NamedThing : related_to click NamedThing href "../NamedThing/" ReferenceImplementation : requires_registration ReferenceImplementation : responsible_organization ReferenceImplementation --> "*" Organization : responsible_organization click Organization href "../Organization/" ReferenceImplementation : subclass_of ReferenceImplementation --> "*" NamedThing : subclass_of click NamedThing href "../NamedThing/" ReferenceImplementation : url ReferenceImplementation : used_in_bridge2ai

Inheritance

NamedThing
- DataStandardOrTool
  - ReferenceImplementation

Slots

Name	Cardinality and Range	Description	Inheritance
collection	* StandardsCollectionTag	Tags for specific sets of standards	DataStandardOrTool
concerns_data_topic	* DataTopic	Subject standard is generally applied in the context of object data topic	DataStandardOrTool
has_relevant_organization	* Organization	Subject standard has some relationship to the object organization(s), includi...	DataStandardOrTool
has_training_resource	* DataStandardOrTool	Relevant training resources, standard usage manuals, or other documentation f...	DataStandardOrTool
purpose_detail	0..1 String	Text description of the standard or tool	DataStandardOrTool
is_open	0..1 Boolean	Is the standard or tool FAIR and available free of cost?	DataStandardOrTool
requires_registration	0..1 Boolean	Does usage of the standard or tool require registration of a user or group wi...	DataStandardOrTool
url	0..1 Uriorcurie	URL for basic documentation of the standard or tool	DataStandardOrTool
publication	0..1 Uriorcurie	Relevant publication for the standard or tool	DataStandardOrTool
formal_specification	0..1 Uriorcurie	Relevant code repository or other location for a formal specification of the ...	DataStandardOrTool
responsible_organization	* Organization	Organization(s) responsible for providing and/or supporting the standard or t...	DataStandardOrTool
has_relevant_data_substrate	* DataSubstrate	Subject standard has some relationship to the object data substrate(s), inclu...	DataStandardOrTool
id	1 Uriorcurie	A unique identifier for a thing	NamedThing
category	0..1 CategoryType	CURIE for the high level ontology class in which this entity is categorized	NamedThing
name	0..1 String	A human-readable name for a thing	NamedThing
description	0..1 String	A human-readable description for a thing	NamedThing
subclass_of	* NamedThing	Holds between two classes where the domain class is a specialization of the r...	NamedThing
related_to	* NamedThing	A relationship that is asserted between two named things	NamedThing
contributor_name	0..1 String	The name of the person who added this node	NamedThing
contributor_github_name	0..1 String	The name of the github user who added this node	NamedThing
contributor_orcid	0..1 Uriorcurie	The ORCiD of the person who added this node	NamedThing
contribution_date	0..1 Date	The date on which the node was added	NamedThing
used_in_bridge2ai	0..1 Boolean	True if the entity is used, developed, or otherwise related to work in the Br...	NamedThing
has_application	* Application	A list of one or more specific applications of this entity to a specific purp...	NamedThing

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/bridge2ai/standards-schema-all

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/bridge2ai/standards-schema-all/ReferenceImplementation
native	https://w3id.org/bridge2ai/standards-schema-all/ReferenceImplementation

LinkML Source

Direct

name: ReferenceImplementation
description: Represents an implementation of one or more standards or tools in the
  Bridge2AI Standards Registry, whether as a full specification in a particular language
  or as an application to a specific use case.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
is_a: DataStandardOrTool

Induced

name: ReferenceImplementation
description: Represents an implementation of one or more standards or tools in the
  Bridge2AI Standards Registry, whether as a full specification in a particular language
  or as an application to a specific use case.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
is_a: DataStandardOrTool
attributes:
  collection:
    name: collection
    description: Tags for specific sets of standards.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: collection
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: StandardsCollectionTag
    multivalued: true
  concerns_data_topic:
    name: concerns_data_topic
    description: Subject standard is generally applied in the context of object data
      topic.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: related_to
    domain: DataStandardOrTool
    inherited: true
    alias: concerns_data_topic
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: DataTopic
    multivalued: true
  has_relevant_organization:
    name: has_relevant_organization
    description: Subject standard has some relationship to the object organization(s),
      including as a user. This is distinct from the responsible organization, which
      is the group providing or supporting the standard or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: related_to
    domain: DataStandardOrTool
    inherited: true
    alias: has_relevant_organization
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: Organization
    multivalued: true
  has_training_resource:
    name: has_training_resource
    description: Relevant training resources, standard usage manuals, or other documentation
      for the standard or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: has_training_resource
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: DataStandardOrTool
    multivalued: true
  purpose_detail:
    name: purpose_detail
    description: Text description of the standard or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: purpose_detail
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: string
  is_open:
    name: is_open
    description: Is the standard or tool FAIR and available free of cost?
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: is_open
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: boolean
  requires_registration:
    name: requires_registration
    description: Does usage of the standard or tool require registration of a user
      or group with some organization or managerial body?
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: requires_registration
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: boolean
  url:
    name: url
    description: URL for basic documentation of the standard or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: url
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    - Organization
    range: uriorcurie
  publication:
    name: publication
    description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: publication
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: uriorcurie
  formal_specification:
    name: formal_specification
    description: Relevant code repository or other location for a formal specification
      of the standard or tool. Often a URL, particularly to a Git repository.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: formal_specification
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: uriorcurie
  responsible_organization:
    name: responsible_organization
    description: Organization(s) responsible for providing and/or supporting the standard
      or tool.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: DataStandardOrTool
    alias: responsible_organization
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: Organization
    multivalued: true
  has_relevant_data_substrate:
    name: has_relevant_data_substrate
    description: Subject standard has some relationship to the object data substrate(s),
      including whether it is intended to be used with the data substrate, or whether
      it is implemented through the data substrate.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: related_to
    domain: DataStandardOrTool
    inherited: true
    alias: has_relevant_data_substrate
    owner: ReferenceImplementation
    domain_of:
    - DataStandardOrTool
    range: DataSubstrate
    multivalued: true
  id:
    name: id
    description: A unique identifier for a thing.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  category:
    name: category
    description: CURIE for the high level ontology class in which this entity is categorized.
      Corresponds to the label for the entity type class, e.g., "B2AI_STANDARD:DataStandard".
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: type
    domain: NamedThing
    designates_type: true
    alias: category
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: category_type
  name:
    name: name
    description: A human-readable name for a thing.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: string
  subclass_of:
    name: subclass_of
    description: Holds between two classes where the domain class is a specialization
      of the range class.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    exact_mappings:
    - rdfs:subClassOf
    - MESH:isa
    narrow_mappings:
    - rdfs:subPropertyOf
    rank: 1000
    is_a: related_to
    domain: NamedThing
    inherited: true
    alias: subclass_of
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: NamedThing
    multivalued: true
  related_to:
    name: related_to
    description: A relationship that is asserted between two named things.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    domain: NamedThing
    inherited: true
    alias: related_to
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    - Organization
    symmetric: true
    range: NamedThing
    multivalued: true
  contributor_name:
    name: contributor_name
    description: The name of the person who added this node.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: contributor_name
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: string
  contributor_github_name:
    name: contributor_github_name
    description: The name of the github user who added this node.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: contributor_github_name
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: string
  contributor_orcid:
    name: contributor_orcid
    description: The ORCiD of the person who added this node.
    examples:
    - value: ORCID:0000-0001-1234-5678
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: contributor_orcid
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: uriorcurie
  contribution_date:
    name: contribution_date
    description: The date on which the node was added.
    examples:
    - value: '2023-03-20'
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: contribution_date
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: date
  used_in_bridge2ai:
    name: used_in_bridge2ai
    description: True if the entity is used, developed, or otherwise related to work
      in the Bridge2AI consortium. If false, the entity is not explicitly related
      to Bridge2AI. If not specified, it is not known if the entity is related to
      Bridge2AI.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    is_a: node_property
    domain: NamedThing
    alias: used_in_bridge2ai
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: boolean
  has_application:
    name: has_application
    description: A list of one or more specific applications of this entity to a specific
      purpose.
    from_schema: https://w3id.org/bridge2ai/standards-schema-all
    rank: 1000
    domain: NamedThing
    alias: has_application
    owner: ReferenceImplementation
    domain_of:
    - NamedThing
    range: Application
    multivalued: true
    inlined: true
    inlined_as_list: true